Pseudomonas stutzeri DSM 10701, PSJM300_13685

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri DSM 10701
GCF_000279165.1|latest
Locus Tag
PSJM300_13685
Name
Replicon chromosome
Genomic location 2997736 - 3000174 (+ strand)

Cross-References

RefSeq YP_006525157.1
GI 397687838
Entrez 13329052
INSDC AFN78799.1
NCBI Locus Tag PSJM300_13685
UniParc UPI00026D67CC
UniProtKB Acc I7A2K1
UniProtKB ID I7A2K1_PSEST
UniRef100 UniRef100_I7A2K1
UniRef50 UniRef50_A4VJZ0
UniRef90 UniRef90_I7A2K1

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent RNA helicase
Synonyms
Evidence for Translation
Charge (pH 7) 3.93
Kyte-Doolittle Hydrophobicity Value -0.353
Molecular Weight (kDa) 92766.8
Isoelectric Point (pI) 7.39

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 185 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG026678 (28 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSJM300_13685

Human Homologs

Ensembl 110, assembly GRCh38.p14
Suv3 like RNA helicase [Source:HGNC Symbol;Acc:HGNC:11471]
E-value: 1.5e-45
Percent Identity: 29.0

References

No references are associated with this feature.