Pseudomonas stutzeri RCH2, Psest_0404
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas stutzeri RCH2
GCF_000327065.1|latest |
| Locus Tag |
Psest_0404
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 439233 - 440738 (+ strand) |
Cross-References
| RefSeq | YP_007238645.1 |
| GI | 431925611 |
| Entrez | 14298259 |
| NCBI Locus Tag | Psest_0404 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
phytoene desaturase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 0.70 |
| Kyte-Doolittle Hydrophobicity Value | -0.179 |
| Molecular Weight (kDa) | 55726.0 |
| Isoelectric Point (pI) | 7.08 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 305 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG016700 (72 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Psest_0404
Search term: phytoene desaturase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
retinol saturase [Source:HGNC Symbol;Acc:HGNC:25991]
E-value:
4.0e-09
Percent Identity:
24.0
|
|
Ensembl
110, assembly
GRCh38.p14
|
retinol saturase [Source:HGNC Symbol;Acc:HGNC:25991]
E-value:
4.0e-09
Percent Identity:
24.0
|
References
No references are associated with this feature.