Pseudomonas stutzeri RCH2, Psest_0914

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas stutzeri RCH2
GCF_000327065.1|latest
Locus Tag
Psest_0914
Name
Replicon chromosome
Genomic location 992050 - 994269 (+ strand)

Cross-References

RefSeq YP_007239126.1
GI 431926092
Entrez 14298769
INSDC AGA85496.1
NCBI Locus Tag Psest_0914
UniParc UPI0002A18441
UniProtKB Acc L0GHP2
UniProtKB ID L0GHP2_PSEST
UniRef100 UniRef100_L0GHP2
UniRef50 UniRef50_A9BN75
UniRef90 UniRef90_A4VQ38

Product

Feature Type CDS
Coding Frame 1
Product Name
Lhr-like helicase
Synonyms
Evidence for Translation
Charge (pH 7) -11.04
Kyte-Doolittle Hydrophobicity Value -0.110
Molecular Weight (kDa) 81042.5
Isoelectric Point (pI) 5.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 536 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG014860 (42 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psest_0914
Search term: Lhr-like helicase

Human Homologs

Ensembl 97, assembly GRCh38.p12
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value: 3.0e-09
Percent Identity: 22.3
Ensembl 97, assembly GRCh38.p12
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value: 3.0e-09
Percent Identity: 22.3
Ensembl 97, assembly GRCh38.p12
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value: 3.0e-09
Percent Identity: 22.3
Ensembl 97, assembly GRCh38.p12
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value: 3.0e-09
Percent Identity: 22.3
Ensembl 97, assembly GRCh38.p12
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value: 3.0e-09
Percent Identity: 22.3

References

No references are associated with this feature.