Pseudomonas stutzeri RCH2, Psest_1627

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas stutzeri RCH2
GCF_000327065.1|latest
Locus Tag
Psest_1627
Name
Replicon chromosome
Genomic location 1729244 - 1730575 (+ strand)

Cross-References

RefSeq YP_007239807.1
GI 431926773
Entrez 14299480
INSDC AGA86177.1
NCBI Locus Tag Psest_1627
UniParc UPI0002A18724
UniProtKB Acc L0GK65
UniProtKB ID L0GK65_PSEST
UniRef100 UniRef100_L0GK65
UniRef50 UniRef50_A0A098FQD5
UniRef90 UniRef90_A0A098FQD5

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA/RNA helicase
Synonyms
Evidence for Translation
Charge (pH 7) 20.12
Kyte-Doolittle Hydrophobicity Value -0.325
Molecular Weight (kDa) 49061.6
Isoelectric Point (pI) 10.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 643 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002174 (555 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psest_1627
Search term: DNA/RNA helicase

Human Homologs

Ensembl 97, assembly GRCh38.p12
DEAD-box helicase 27 [Source:HGNC Symbol;Acc:HGNC:15837]
E-value: 1.5e-61
Percent Identity: 38.1
Ensembl 97, assembly GRCh38.p12
DEAD-box helicase 27 [Source:HGNC Symbol;Acc:HGNC:15837]
E-value: 1.5e-61
Percent Identity: 38.1
Ensembl 97, assembly GRCh38.p12
DEAD-box helicase 27 [Source:HGNC Symbol;Acc:HGNC:15837]
E-value: 1.5e-61
Percent Identity: 38.1

References

No references are associated with this feature.