Pseudomonas stutzeri RCH2, Psest_1648
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas stutzeri RCH2
GCF_000327065.1|latest |
| Locus Tag |
Psest_1648
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 1752859 - 1754568 (- strand) |
Cross-References
| RefSeq | YP_007239828.1 |
| GI | 431926794 |
| Entrez | 14299501 |
| NCBI Locus Tag | Psest_1648 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ATP-dependent DNA ligase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -7.91 |
| Kyte-Doolittle Hydrophobicity Value | -0.322 |
| Molecular Weight (kDa) | 64066.5 |
| Isoelectric Point (pI) | 5.61 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 247 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG015267 (182 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Psest_1648
Search term: ATP-dependent DNA ligase
|
Human Homologs
References
No references are associated with this feature.