Pseudomonas stutzeri RCH2, Psest_2144

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri RCH2
GCF_000327065.1|latest
Locus Tag
Psest_2144
Name
Replicon chromosome
Genomic location 2287076 - 2290246 (- strand)

Cross-References

RefSeq YP_007240308.1
GI 431927274
Entrez 14299996
INSDC AGA86678.1
NCBI Locus Tag Psest_2144
UniParc UPI0002A18529
UniProtKB Acc L0GIW4
UniProtKB ID L0GIW4_PSEST
UniRef100 UniRef100_L0GIW4
UniRef50 UniRef50_Q8EBL9
UniRef90 UniRef90_A0A098FN42

Product

Feature Type CDS
Coding Frame 1
Product Name
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
Synonyms
Evidence for Translation
Charge (pH 7) -16.91
Kyte-Doolittle Hydrophobicity Value 0.300
Molecular Weight (kDa) 114413.2
Isoelectric Point (pI) 4.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
adeF AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH. [PMID:20696879] ARO:3000777 protein homolog model Strict 1335.1 66.29 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 490 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000417 (2093 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psest_2144

Human Homologs

References

No references are associated with this feature.