Pseudomonas stutzeri RCH2, Psest_4085

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri RCH2
GCF_000327065.1|latest
Locus Tag
Psest_4085
Name
Replicon chromosome
Genomic location 4261006 - 4262421 (- strand)

Cross-References

RefSeq YP_007242185.1
GI 431929151
Entrez 14301932
INSDC AGA88555.1
NCBI Locus Tag Psest_4085
UniParc UPI0002A18697
UniProtKB Acc L0GT54
UniProtKB ID L0GT54_PSEST
UniRef100 UniRef100_L0GT54
UniRef50 UniRef50_P49787
UniRef90 UniRef90_A0A069Q656

Product

Feature Type CDS
Coding Frame 1
Product Name
biotin carboxylase
Synonyms
Evidence for Translation
Charge (pH 7) -0.82
Kyte-Doolittle Hydrophobicity Value -0.197
Molecular Weight (kDa) 51882.7
Isoelectric Point (pI) 6.85

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 630 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004986 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psest_4085

Human Homologs

Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 2.8e-121
Percent Identity: 48.1
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 2.8e-121
Percent Identity: 48.1
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 2.8e-121
Percent Identity: 48.1
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 2.8e-121
Percent Identity: 48.1
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 2.8e-121
Percent Identity: 48.1
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 2.8e-121
Percent Identity: 48.1
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 2.8e-121
Percent Identity: 48.1
Ensembl 110, assembly GRCh38.p14
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 2.8e-121
Percent Identity: 48.1

References

No references are associated with this feature.