Pseudomonas mendocina ymp, Pmen_2014
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas mendocina ymp
GCF_000016565.1|latest |
| Locus Tag |
Pmen_2014
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2224193 - 2225062 (+ strand) |
Cross-References
| RefSeq | YP_001187507.1 |
| GI | 146307042 |
| Entrez | 5109905 |
| NCBI Locus Tag | Pmen_2014 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
LysR family transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.33 |
| Kyte-Doolittle Hydrophobicity Value | 0.151 |
| Molecular Weight (kDa) | 31485.9 |
| Isoelectric Point (pI) | 5.46 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 504 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000789 (471 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Pmen_2014
Search term: LysR family transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.