Pseudomonas mendocina ymp, Pmen_2195
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas mendocina ymp
GCF_000016565.1|latest |
| Locus Tag |
Pmen_2195
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2427120 - 2428778 (- strand) |
Cross-References
| RefSeq | YP_001187687.1 |
| GI | 146307222 |
| EC Number | 6.5.1.1 |
| Entrez | 5109140 |
| NCBI Locus Tag | Pmen_2195 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ATP-dependent DNA ligase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -1.28 |
| Kyte-Doolittle Hydrophobicity Value | -0.272 |
| Molecular Weight (kDa) | 62292.6 |
| Isoelectric Point (pI) | 6.66 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 265 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG015267 (193 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Pmen_2195
Search term: ATP-dependent DNA ligase
|
Human Homologs
References
No references are associated with this feature.