Pseudomonas mendocina ymp, Pmen_2196
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas mendocina ymp
GCF_000016565.1|latest |
| Locus Tag |
Pmen_2196
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2428775 - 2429782 (- strand) |
Cross-References
| RefSeq | YP_001187688.1 |
| GI | 146307223 |
| Entrez | 5109141 |
| INSDC | ABP84956.1 |
| NCBI Locus Tag | Pmen_2196 |
| UniParc | UPI0000E7D88D |
| UniProtKB Acc | A4XUE0 |
| UniProtKB ID | A4XUE0_PSEMY |
| UniRef100 | UniRef100_A4XUE0 |
| UniRef50 | UniRef50_F8GR62 |
| UniRef90 | UniRef90_A4XUE0 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
RNA procession exonuclease-like protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -5.48 |
| Kyte-Doolittle Hydrophobicity Value | -0.286 |
| Molecular Weight (kDa) | 36974.2 |
| Isoelectric Point (pI) | 6.34 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 129 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG015268 (191 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Pmen_2196
Search term: RNA procession exonuclease-like protein
|
Human Homologs
References
No references are associated with this feature.