Pseudomonas mendocina ymp, Pmen_2201
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas mendocina ymp
GCF_000016565.1|latest |
| Locus Tag |
Pmen_2201
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2434607 - 2435509 (+ strand) |
Cross-References
| RefSeq | YP_001187693.1 |
| GI | 146307228 |
| Entrez | 5109146 |
| INSDC | ABP84961.1 |
| NCBI Locus Tag | Pmen_2201 |
| UniParc | UPI0000E7D86C |
| UniProtKB Acc | A4XUE5 |
| UniProtKB ID | A4XUE5_PSEMY |
| UniRef100 | UniRef100_A4XUE5 |
| UniRef50 | UniRef50_Q9I0Z0 |
| UniRef90 | UniRef90_A4XUE5 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
LysR family transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 0.67 |
| Kyte-Doolittle Hydrophobicity Value | -0.041 |
| Molecular Weight (kDa) | 33058.6 |
| Isoelectric Point (pI) | 7.52 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 242 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG016442 (144 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Pmen_2201
Search term: LysR family transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.