Pseudomonas mendocina ymp, Pmen_2203
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas mendocina ymp
GCF_000016565.1|latest |
| Locus Tag |
Pmen_2203
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2436352 - 2438055 (+ strand) |
Cross-References
| RefSeq | YP_001187695.1 |
| GI | 146307230 |
| Entrez | 5109148 |
| INSDC | ABP84963.1 |
| NCBI Locus Tag | Pmen_2203 |
| UniParc | UPI0000E7D884 |
| UniProtKB Acc | A4XUE7 |
| UniProtKB ID | A4XUE7_PSEMY |
| UniRef100 | UniRef100_A4XUE7 |
| UniRef50 | UniRef50_A4XUE7 |
| UniRef90 | UniRef90_A4XUE7 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ABC transporter-like protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 4.42 |
| Kyte-Doolittle Hydrophobicity Value | 0.315 |
| Molecular Weight (kDa) | 61404.4 |
| Isoelectric Point (pI) | 9.14 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG024935 (4 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Pmen_2203
Search term: ABC transporter-like protein
|
Human Homologs
|
Ensembl
107, assembly
GRCh38.p13
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
1.7e-56
Percent Identity:
30.6
|
|
Ensembl
107, assembly
GRCh38.p13
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
1.7e-56
Percent Identity:
30.6
|
|
Ensembl
107, assembly
GRCh38.p13
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
1.7e-56
Percent Identity:
30.6
|
|
Ensembl
107, assembly
GRCh38.p13
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
1.7e-56
Percent Identity:
30.6
|
|
Ensembl
107, assembly
GRCh38.p13
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
1.7e-56
Percent Identity:
30.6
|
|
Ensembl
107, assembly
GRCh38.p13
|
ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
E-value:
1.7e-56
Percent Identity:
30.6
|
References
No references are associated with this feature.