Pseudomonas mendocina ymp, Pmen_2313

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas mendocina ymp
GCF_000016565.1|latest
Locus Tag
Pmen_2313
Name
Replicon chromosome
Genomic location 2549688 - 2552744 (- strand)

Cross-References

RefSeq YP_001187803.1
GI 146307338
Entrez 5108548
INSDC ABP85071.1
NCBI Locus Tag Pmen_2313
UniParc UPI0000E7A307
UniProtKB Acc A4XUQ5
UniProtKB ID A4XUQ5_PSEMY
UniRef100 UniRef100_A4XUQ5
UniRef50 UniRef50_Q9I758
UniRef90 UniRef90_A4XUQ5

Product

Feature Type CDS
Coding Frame 1
Product Name
protein kinase
Synonyms
Evidence for Translation
Charge (pH 7) -23.91
Kyte-Doolittle Hydrophobicity Value -0.239
Molecular Weight (kDa) 110407.6
Isoelectric Point (pI) 4.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 463 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000073 (1398 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pmen_2313
Search term: protein kinase

Human Homologs

Ensembl 97, assembly GRCh38.p12
mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
E-value: 2.9e-23
Percent Identity: 34.0
Ensembl 97, assembly GRCh38.p12
mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
E-value: 2.9e-23
Percent Identity: 34.0
Ensembl 97, assembly GRCh38.p12
mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
E-value: 2.9e-23
Percent Identity: 34.0

References

No references are associated with this feature.