Pseudomonas mendocina ymp, Pmen_2399 (mnmA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas mendocina ymp
GCF_000016565.1|latest
Locus Tag
Pmen_2399
Name
mnmA
Replicon chromosome
Genomic location 2647440 - 2648552 (+ strand)

Cross-References

RefSeq YP_001187887.1
GI 146307422
EC Number 2.1.1.61
Entrez 5108239
NCBI Locus Tag Pmen_2399

Product

Feature Type CDS
Coding Frame 1
Product Name
tRNA-specific 2-thiouridylase MnmA
Synonyms
Evidence for Translation
Charge (pH 7) -10.25
Kyte-Doolittle Hydrophobicity Value -0.379
Molecular Weight (kDa) 41386.3
Isoelectric Point (pI) 5.06

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 582 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002926 (552 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pmen_2399
Search term: mnmA

Human Homologs

Ensembl 97, assembly GRCh38.p12
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Source:HGNC Symbol;Acc:HGNC:25481]
E-value: 3.3e-73
Percent Identity: 40.0

References

No references are associated with this feature.