Pseudomonas mendocina ymp, Pmen_2399 (mnmA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas mendocina ymp
GCF_000016565.1|latest |
| Locus Tag |
Pmen_2399
|
| Name |
mnmA
|
| Replicon | chromosome |
| Genomic location | 2647440 - 2648552 (+ strand) |
Cross-References
| RefSeq | YP_001187887.1 |
| GI | 146307422 |
| EC Number | 2.1.1.61 |
| Entrez | 5108239 |
| NCBI Locus Tag | Pmen_2399 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
tRNA-specific 2-thiouridylase MnmA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -10.25 |
| Kyte-Doolittle Hydrophobicity Value | -0.379 |
| Molecular Weight (kDa) | 41386.3 |
| Isoelectric Point (pI) | 5.06 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 582 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002926 (552 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Pmen_2399
Search term: mnmA
Search term: tRNA-specific 2-thiouridylase MnmA
|
Human Homologs
|
Ensembl
97, assembly
GRCh38.p12
|
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Source:HGNC Symbol;Acc:HGNC:25481]
E-value:
3.3e-73
Percent Identity:
40.0
|
References
No references are associated with this feature.