Pseudomonas mendocina ymp, Pmen_3709
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas mendocina ymp
GCF_000016565.1|latest |
| Locus Tag |
Pmen_3709
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4092305 - 4094350 (- strand) |
Cross-References
| RefSeq | YP_001189189.1 |
| GI | 146308724 |
| Entrez | 5105704 |
| INSDC | ABP86457.1 |
| NCBI Locus Tag | Pmen_3709 |
| UniParc | UPI0000E7D441 |
| UniProtKB Acc | A4XYP1 |
| UniProtKB ID | A4XYP1_PSEMY |
| UniRef100 | UniRef100_A4XYP1 |
| UniRef50 | UniRef50_A4XYP1 |
| UniRef90 | UniRef90_A4XYP1 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
TonB-dependent receptor
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -11.42 |
| Kyte-Doolittle Hydrophobicity Value | -0.392 |
| Molecular Weight (kDa) | 74859.6 |
| Isoelectric Point (pI) | 5.92 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 237 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG025155 (5 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Pmen_3709
Search term: TonB-dependent receptor
|
Human Homologs
References
No references are associated with this feature.