Pseudomonas mendocina ymp, Pmen_4087

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas mendocina ymp
GCF_000016565.1|latest
Locus Tag
Pmen_4087
Name
Replicon chromosome
Genomic location 4476961 - 4478130 (- strand)

Cross-References

RefSeq YP_001189566.1
GI 146309101
EC Number 2.3.1.47
Entrez 5106384
INSDC ABP86834.1
NCBI Locus Tag Pmen_4087
UniParc UPI0000E79882
UniProtKB Acc A4XZR8
UniProtKB ID BIOF_PSEMY
UniRef100 UniRef100_A4XZR8
UniRef50 UniRef50_Q3BYN0
UniRef90 UniRef90_A4XZR8

Product

Feature Type CDS
Coding Frame 1
Product Name
8-amino-7-oxononanoate synthase
Synonyms
Evidence for Translation
Charge (pH 7) -6.53
Kyte-Doolittle Hydrophobicity Value 0.103
Molecular Weight (kDa) 41549.1
Isoelectric Point (pI) 5.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 507 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000488 (551 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pmen_4087

Human Homologs

Ensembl 97, assembly GRCh38.p12
glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
E-value: 1.8e-61
Percent Identity: 37.5

References

No references are associated with this feature.