Pseudomonas mendocina ymp, Pmen_4445

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas mendocina ymp
GCF_000016565.1|latest
Locus Tag
Pmen_4445
Name
Replicon chromosome
Genomic location 4872973 - 4875531 (- strand)

Cross-References

RefSeq YP_001189924.1
GI 146309459
Entrez 5107140
INSDC ABP87192.1
NCBI Locus Tag Pmen_4445
UniParc UPI0000E7DD0F
UniProtKB Acc A4Y0S6
UniProtKB ID A4Y0S6_PSEMY
UniRef100 UniRef100_A4Y0S6
UniRef50 UniRef50_Q6LV55
UniRef90 UniRef90_A4Y0S6

Product

Feature Type CDS
Coding Frame 1
Product Name
TRAP transporter, 4TM/12TM fusion protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.28
Kyte-Doolittle Hydrophobicity Value 0.740
Molecular Weight (kDa) 91298.2
Isoelectric Point (pI) 7.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 274 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG025323 (34 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pmen_4445

Human Homologs

References

No references are associated with this feature.