Pseudomonas mendocina ymp, Pmen_4479

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas mendocina ymp
GCF_000016565.1|latest
Locus Tag
Pmen_4479
Name
Replicon chromosome
Genomic location 4909762 - 4911177 (- strand)

Cross-References

RefSeq YP_001189958.1
GI 146309493
EC Number 6.4.1.2
Entrez 5107174
INSDC ABP87226.1
NCBI Locus Tag Pmen_4479
UniParc UPI0000E7DD0A
UniProtKB Acc A4Y0W0
UniProtKB ID A4Y0W0_PSEMY
UniRef100 UniRef100_A4Y0W0
UniRef50 UniRef50_P49787
UniRef90 UniRef90_A0A069Q656

Product

Feature Type CDS
Coding Frame 1
Product Name
pyruvate carboxylase subunit A
Synonyms
Evidence for Translation
Charge (pH 7) -3.55
Kyte-Doolittle Hydrophobicity Value -0.255
Molecular Weight (kDa) 52.2
Isoelectric Point (pI) 6.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 635 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004986 (552 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pmen_4479

Human Homologs

Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 1.3e-122
Percent Identity: 48.4
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 1.3e-122
Percent Identity: 48.4
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 1.3e-122
Percent Identity: 48.4
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 1.3e-122
Percent Identity: 48.4
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 1.3e-122
Percent Identity: 48.4
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 1.3e-122
Percent Identity: 48.4
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 1.3e-122
Percent Identity: 48.4
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 1.3e-122
Percent Identity: 48.4

References

No references are associated with this feature.