Pseudomonas mendocina NK-01, MDS_0011

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0011
Name
Replicon chromosome
Genomic location 12538 - 15564 (- strand)

Cross-References

RefSeq YP_004377794.1
GI 330500925
Entrez 10454793
INSDC AEB56042.1
NCBI Locus Tag MDS_0011
UniParc UPI000206E933
UniProtKB Acc F4DV27
UniProtKB ID F4DV27_PSEMN
UniRef100 UniRef100_F4DV27
UniRef50 UniRef50_F4DV27
UniRef90 UniRef90_F4DV27

Product

Feature Type CDS
Coding Frame 1
Product Name
PpkA-like protein
Synonyms
Evidence for Translation
Charge (pH 7) -20.40
Kyte-Doolittle Hydrophobicity Value -0.192
Molecular Weight (kDa) 108417.3
Isoelectric Point (pI) 5.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 457 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000073 (1398 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0011
Search term: PpkA-like protein

Human Homologs

Ensembl 97, assembly GRCh38.p12
aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
E-value: 6.3e-26
Percent Identity: 30.2
Ensembl 97, assembly GRCh38.p12
aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
E-value: 6.3e-26
Percent Identity: 30.2
Ensembl 97, assembly GRCh38.p12
aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
E-value: 6.3e-26
Percent Identity: 30.2
Ensembl 97, assembly GRCh38.p12
aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
E-value: 6.3e-26
Percent Identity: 30.2
Ensembl 97, assembly GRCh38.p12
aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
E-value: 6.3e-26
Percent Identity: 30.2
Ensembl 97, assembly GRCh38.p12
aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
E-value: 6.3e-26
Percent Identity: 30.2
Ensembl 97, assembly GRCh38.p12
aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
E-value: 6.3e-26
Percent Identity: 30.2

References

No references are associated with this feature.