Pseudomonas mendocina NK-01, MDS_0078

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0078
Name
Replicon chromosome
Genomic location 91323 - 92282 (+ strand)

Cross-References

RefSeq YP_004377861.1
GI 330500992
Entrez 10454860
NCBI Locus Tag MDS_0078

Product

Feature Type CDS
Coding Frame 1
Product Name
coproporphyrinogen III oxidase
Synonyms
Evidence for Translation
Charge (pH 7) -10.71
Kyte-Doolittle Hydrophobicity Value -0.381
Molecular Weight (kDa) 35884.8
Isoelectric Point (pI) 5.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 279 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000024 (554 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0078

Human Homologs

Ensembl 97, assembly GRCh38.p12
coproporphyrinogen oxidase [Source:HGNC Symbol;Acc:HGNC:2321]
E-value: 1.1e-74
Percent Identity: 44.4

References

No references are associated with this feature.