Pseudomonas mendocina NK-01, MDS_0082

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0082
Name
Replicon chromosome
Genomic location 95257 - 96177 (- strand)

Cross-References

RefSeq YP_004377865.1
GI 330500996
Entrez 10454864
NCBI Locus Tag MDS_0082

Product

Feature Type CDS
Coding Frame 1
Product Name
glycine/betaine ABC transporter substrate-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.59
Kyte-Doolittle Hydrophobicity Value -0.127
Molecular Weight (kDa) 33087.4
Isoelectric Point (pI) 4.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 137 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000030 (491 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0082

Human Homologs

References

No references are associated with this feature.