Pseudomonas mendocina NK-01, MDS_0141

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0141
Name
Replicon chromosome
Genomic location 156389 - 157315 (+ strand)

Cross-References

RefSeq YP_004377924.1
GI 330501055
Entrez 10454923
INSDC AEB56172.1
NCBI Locus Tag MDS_0141
UniParc UPI000206EA38
UniProtKB Acc F4DW42
UniProtKB ID F4DW42_PSEMN
UniRef100 UniRef100_F4DW42
UniRef50 UniRef50_G8Q8Y4
UniRef90 UniRef90_F4DW42

Product

Feature Type CDS
Coding Frame 1
Product Name
multidrug ABC transporter ATPase
Synonyms
Evidence for Translation
Charge (pH 7) 2.38
Kyte-Doolittle Hydrophobicity Value -0.183
Molecular Weight (kDa) 33444.1
Isoelectric Point (pI) 7.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002234 (362 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0141

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
E-value: 8.9e-32
Percent Identity: 32.6
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
E-value: 8.9e-32
Percent Identity: 32.6

References

No references are associated with this feature.