Pseudomonas mendocina NK-01, MDS_0141
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas mendocina NK-01
GCF_000204295.1|latest |
| Locus Tag |
MDS_0141
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 156389 - 157315 (+ strand) |
Cross-References
| RefSeq | YP_004377924.1 |
| GI | 330501055 |
| Entrez | 10454923 |
| INSDC | AEB56172.1 |
| NCBI Locus Tag | MDS_0141 |
| UniParc | UPI000206EA38 |
| UniProtKB Acc | F4DW42 |
| UniProtKB ID | F4DW42_PSEMN |
| UniRef100 | UniRef100_F4DW42 |
| UniRef50 | UniRef50_G8Q8Y4 |
| UniRef90 | UniRef90_F4DW42 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
multidrug ABC transporter ATPase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 2.38 |
| Kyte-Doolittle Hydrophobicity Value | -0.183 |
| Molecular Weight (kDa) | 33444.1 |
| Isoelectric Point (pI) | 7.88 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002234 (362 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: MDS_0141
Search term: multidrug ABC transporter ATPase
|
Human Homologs
|
Ensembl
107, assembly
GRCh38.p13
|
ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
E-value:
1.0e-31
Percent Identity:
32.6
|
|
Ensembl
107, assembly
GRCh38.p13
|
ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
E-value:
1.0e-31
Percent Identity:
32.6
|
References
No references are associated with this feature.