Pseudomonas mendocina NK-01, MDS_0160

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0160
Name
Replicon chromosome
Genomic location 173013 - 173579 (+ strand)

Cross-References

RefSeq YP_004377943.1
GI 330501074
Entrez 10454942
INSDC AEB56191.1
NCBI Locus Tag MDS_0160
UniParc UPI000206EA4B
UniProtKB Acc F4DW61
UniProtKB ID F4DW61_PSEMN
UniRef100 UniRef100_F4DW61
UniRef50 UniRef50_G8PXA7
UniRef90 UniRef90_W6QP33

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome c oxidase assembly protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.41
Kyte-Doolittle Hydrophobicity Value 0.124
Molecular Weight (kDa) 21010.3
Isoelectric Point (pI) 6.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 126 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000105 (514 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0160

Human Homologs

References

No references are associated with this feature.