Pseudomonas mendocina NK-01, MDS_0506

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0506
Name
Replicon chromosome
Genomic location 542341 - 542880 (+ strand)

Cross-References

RefSeq YP_004378289.1
GI 330501420
Entrez 10455288
INSDC AEB56537.1
NCBI Locus Tag MDS_0506
UniParc UPI000206E916
UniProtKB Acc F4DLK7
UniProtKB ID F4DLK7_PSEMN
UniRef100 UniRef100_F4DLK7
UniRef50 UniRef50_C1DKG6
UniRef90 UniRef90_F4DLK7

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.11
Kyte-Doolittle Hydrophobicity Value 0.130
Molecular Weight (kDa) 19324.0
Isoelectric Point (pI) 7.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 234 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000241 (6008 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0506

Human Homologs

References

No references are associated with this feature.