Pseudomonas mendocina NK-01, MDS_0648

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0648
Name
Replicon chromosome
Genomic location 696910 - 698553 (- strand)

Cross-References

RefSeq YP_004378431.1
GI 330501562
Entrez 10455430
INSDC AEB56679.1
NCBI Locus Tag MDS_0648
UniParc UPI000206EA21
UniProtKB Acc F4DNB9
UniProtKB ID F4DNB9_PSEMN
UniRef100 UniRef100_F4DNB9
UniRef50 UniRef50_P10802
UniRef90 UniRef90_F4DNB9

Product

Feature Type CDS
Coding Frame 1
Product Name
dihydrolipoamide acetyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) -6.86
Kyte-Doolittle Hydrophobicity Value 0.093
Molecular Weight (kDa) 56792.9
Isoelectric Point (pI) 5.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1EAF DIHYDROLIPOAMIDE ACETYLTRANSFERASE 12/16/92 ATOMIC STRUCTURE OF THE CUBIC CORE OF THE PYRUVATE DEHYDROGENASE MULTIENZYME COMPLEX AZOTOBACTER VINELANDII 2.6 X-RAY DIFFRACTION 90.1
1EAC DIHYDROLIPOAMIDE ACETYLTRANSFERASE 12/16/92 ATOMIC STRUCTURE OF THE CUBIC CORE OF THE PYRUVATE DEHYDROGENASE MULTIENZYME COMPLEX AZOTOBACTER VINELANDII 2.6 X-RAY DIFFRACTION 90.1
1DPD DIHYDROLIPOAMIDE ACETYLTRANSFERASE 02/03/95 CRYSTALLOGRAPHIC AND ENZYMATIC INVESTIGATIONS ON THE ROLE OF SER558, HIS610 AND ASN614 IN THE CATALYTIC MECHANISM OF AZOTOBACTER VINELANDII DIHYDROLIPOAMIDE ACETYLTRANSFERASE (E2P) AZOTOBACTER VINELANDII 2.7 X-RAY DIFFRACTION 90.1
1EAE DIHYDROLIPOAMIDE ACETYLTRANSFERASE 12/16/92 ATOMIC STRUCTURE OF THE CUBIC CORE OF THE PYRUVATE DEHYDROGENASE MULTIENZYME COMPLEX AZOTOBACTER VINELANDII 2.6 X-RAY DIFFRACTION 90.1
1DPB DIHYDROLIPOAMIDE ACETYLTRANSFERASE 02/03/95 CRYSTALLOGRAPHIC AND ENZYMATIC INVESTIGATIONS ON THE ROLE OF SER558, HIS610 AND ASN614 IN THE CATALYTIC MECHANISM OF AZOTOBACTER VINELANDII DIHYDROLIPOAMIDE ACETYLTRANSFERASE (E2P) AZOTOBACTER VINELANDII 2.5 X-RAY DIFFRACTION 90.1
1DPC DIHYDROLIPOAMIDE ACETYLTRANSFERASE 02/03/95 CRYSTALLOGRAPHIC AND ENZYMATIC INVESTIGATIONS ON THE ROLE OF SER558, HIS610 AND ASN614 IN THE CATALYTIC MECHANISM OF AZOTOBACTER VINELANDII DIHYDROLIPOAMIDE ACETYLTRANSFERASE (E2P) AZOTOBACTER VINELANDII 2.6 X-RAY DIFFRACTION 90.1
1EAA DIHYDROLIPOAMIDE ACETYLTRANSFERASE 12/16/92 ATOMIC STRUCTURE OF THE CUBIC CORE OF THE PYRUVATE DEHYDROGENASE MULTIENZYME COMPLEX AZOTOBACTER VINELANDII 2.6 X-RAY DIFFRACTION 90.1
1EAD DIHYDROLIPOAMIDE ACETYLTRANSFERASE 12/16/92 ATOMIC STRUCTURE OF THE CUBIC CORE OF THE PYRUVATE DEHYDROGENASE MULTIENZYME COMPLEX AZOTOBACTER VINELANDII 2.6 X-RAY DIFFRACTION 90.1
1EAB DIHYDROLIPOAMIDE ACETYLTRANSFERASE 12/16/92 ATOMIC STRUCTURE OF THE CUBIC CORE OF THE PYRUVATE DEHYDROGENASE MULTIENZYME COMPLEX AZOTOBACTER VINELANDII 2.6 X-RAY DIFFRACTION 90.1

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 531 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004623 (547 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0648

Human Homologs

Ensembl 97, assembly GRCh38.p12
dihydrolipoamide S-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2896]
E-value: 1.1e-32
Percent Identity: 31.6
Ensembl 97, assembly GRCh38.p12
dihydrolipoamide S-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2896]
E-value: 1.1e-32
Percent Identity: 31.6
Ensembl 97, assembly GRCh38.p12
dihydrolipoamide S-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2896]
E-value: 1.1e-32
Percent Identity: 31.6

References

No references are associated with this feature.