Pseudomonas mendocina NK-01, MDS_1381

Gene Feature Overview

Strain	Pseudomonas mendocina NK-01 GCF_000204295.1|latest
Locus Tag	MDS_1381
Name
Replicon	chromosome
Genomic location	1502210 - 1503667 (- strand)

Cross-References

RefSeq	YP_004379164.1
GI	330502295
Entrez	10456163
INSDC	AEB57412.1
NCBI Locus Tag	MDS_1381
UniParc	UPI000206E69D
UniProtKB Acc	F4DW94
UniProtKB ID	F4DW94_PSEMN
UniRef100	UniRef100_F4DW94
UniRef50	UniRef50_D8IV00
UniRef90	UniRef90_F4DW94

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative sodium/solute symporter
Synonyms
Evidence for Translation
Charge (pH 7)	-2.87
Kyte-Doolittle Hydrophobicity Value	0.839
Molecular Weight (kDa)	52395.4
Isoelectric Point (pI)	6.03

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 400 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000284 (771 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: MDS_1381 Search term: putative sodium/solute symporter

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000264047 solute carrier family 5 member 7 [Source:HGNC Symbol;Acc:HGNC:14025] E-value: 4.3e-24 Percent Identity: 27.3
Ensembl 110, assembly GRCh38.p14	ENSP00000387346 solute carrier family 5 member 7 [Source:HGNC Symbol;Acc:HGNC:14025] E-value: 4.3e-24 Percent Identity: 27.3

References