Pseudomonas mendocina NK-01, MDS_1640

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1640
Name
Replicon chromosome
Genomic location 1788756 - 1789370 (- strand)

Cross-References

RefSeq YP_004379423.1
GI 330502554
Entrez 10456422
INSDC AEB57671.1
NCBI Locus Tag MDS_1640
UniParc UPI000206DF18
UniProtKB Acc F4DZ16
UniProtKB ID F4DZ16_PSEMN
UniRef100 UniRef100_F4DZ16
UniRef50 UniRef50_P44858
UniRef90 UniRef90_Q8KT78

Product

Feature Type CDS
Coding Frame 1
Product Name
LexA repressor
Synonyms
Evidence for Translation
Charge (pH 7) -3.09
Kyte-Doolittle Hydrophobicity Value -0.200
Molecular Weight (kDa) 22.4
Isoelectric Point (pI) 5.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 473 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002575 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1640
Search term: LexA repressor

Human Homologs

References

No references are associated with this feature.