Pseudomonas mendocina NK-01, MDS_1688

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1688
Name
Replicon chromosome
Genomic location 1834688 - 1835680 (+ strand)

Cross-References

RefSeq YP_004379471.1
GI 330502602
Entrez 10456470
INSDC AEB57719.1
NCBI Locus Tag MDS_1688
UniParc UPI000206E024
UniProtKB Acc F4DZV3
UniProtKB ID F4DZV3_PSEMN
UniRef100 UniRef100_F4DZV3
UniRef50 UniRef50_P52024
UniRef90 UniRef90_W6R0W5

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA polymerase III subunit delta'
Synonyms
Evidence for Translation
Charge (pH 7) 0.23
Kyte-Doolittle Hydrophobicity Value -0.071
Molecular Weight (kDa) 36.4
Isoelectric Point (pI) 7.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 598 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002621 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1688

Human Homologs

References

No references are associated with this feature.