Pseudomonas mendocina NK-01, MDS_1747

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1747
Name
Replicon chromosome
Genomic location 1892001 - 1893221 (+ strand)

Cross-References

RefSeq YP_004379530.1
GI 330502661
Entrez 10456529
INSDC AEB57778.1
NCBI Locus Tag MDS_1747
UniParc UPI000206E1EF
UniProtKB Acc F4E012
UniProtKB ID F4E012_PSEMN
UniRef100 UniRef100_F4E012
UniRef50 UniRef50_P40732
UniRef90 UniRef90_W6RDX8

Product

Feature Type CDS
Coding Frame 1
Product Name
bifunctional N-succinyldiaminopimelate- aminotransferase/acetylornithine transaminase protein
Synonyms
Evidence for Translation
Charge (pH 7) -5.53
Kyte-Doolittle Hydrophobicity Value 0.028
Molecular Weight (kDa) 43.4
Isoelectric Point (pI) 6.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 639 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000862 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1747

Human Homologs

Ensembl 110, assembly GRCh38.p14
ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091]
E-value: 7.4e-62
Percent Identity: 36.0

References

No references are associated with this feature.