Pseudomonas mendocina NK-01, MDS_1961

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1961
Name
Replicon chromosome
Genomic location 2151719 - 2152003 (+ strand)

Cross-References

RefSeq YP_004379744.1
GI 330502875
Entrez 10456743
INSDC AEB57992.1
NCBI Locus Tag MDS_1961
UniParc UPI00002BFB38
UniProtKB Acc F4DNP7
UniProtKB ID F4DNP7_PSEMN
UniRef100 UniRef100_A4XTF3
UniRef50 UniRef50_P23303
UniRef90 UniRef90_Q885T0

Product

Feature Type CDS
Coding Frame 1
Product Name
integration host factor subunit beta
Synonyms
Evidence for Translation
Charge (pH 7) 3.71
Kyte-Doolittle Hydrophobicity Value -0.694
Molecular Weight (kDa) 10.7
Isoelectric Point (pI) 10.21

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 554 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002454 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1961

Human Homologs

References

No references are associated with this feature.