Pseudomonas mendocina NK-01, MDS_1966

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1966
Name
Replicon chromosome
Genomic location 2157553 - 2158527 (+ strand)

Cross-References

RefSeq YP_004379749.1
GI 330502880
Entrez 10456748
INSDC AEB57997.1
NCBI Locus Tag MDS_1966
UniParc UPI000206D98E
UniProtKB Acc F4DNQ2
UniProtKB ID F4DNQ2_PSEMN
UniRef100 UniRef100_F4DNQ2
UniRef50 UniRef50_O25511
UniRef90 UniRef90_A0A098FQQ3

Product

Feature Type CDS
Coding Frame 1
Product Name
sugar nucleotide epimerase/oxidoreductase
Synonyms
Evidence for Translation
Charge (pH 7) 0.11
Kyte-Doolittle Hydrophobicity Value -0.294
Molecular Weight (kDa) 36309.3
Isoelectric Point (pI) 7.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 536 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG020897 (152 members)
Putative Inparalogs 1 predicted inparalogs
UDP-glucose 4-epimerase (MDS_1410) 30.3% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1966

Human Homologs

References

No references are associated with this feature.