Pseudomonas mendocina NK-01, MDS_2251

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2251
Name
Replicon chromosome
Genomic location 2456613 - 2457161 (- strand)

Cross-References

RefSeq YP_004380034.1
GI 330503165
Entrez 10457033
INSDC AEB58282.1
NCBI Locus Tag MDS_2251
UniParc UPI000206E128
UniProtKB Acc F4DS83
UniProtKB ID F4DS83_PSEMN
UniRef100 UniRef100_F4DS83
UniRef50 UniRef50_Q48KP9
UniRef90 UniRef90_W6QXP9

Product

Feature Type CDS
Coding Frame 1
Product Name
exonuclease
Synonyms
Evidence for Translation
Charge (pH 7) -2.66
Kyte-Doolittle Hydrophobicity Value -0.538
Molecular Weight (kDa) 21.1
Isoelectric Point (pI) 6.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 57 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003789 (514 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2251
Search term: exonuclease

Human Homologs

References

No references are associated with this feature.