Pseudomonas mendocina NK-01, MDS_2254

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2254
Name
Replicon chromosome
Genomic location 2458601 - 2459200 (+ strand)

Cross-References

RefSeq YP_004380037.1
GI 330503168
Entrez 10457036
INSDC AEB58285.1
NCBI Locus Tag MDS_2254
UniParc UPI000206E12B
UniProtKB Acc F4DS86
UniProtKB ID F4DS86_PSEMN
UniRef100 UniRef100_F4DS86
UniRef50 UniRef50_Q9I3D8
UniRef90 UniRef90_F4DS86

Product

Feature Type CDS
Coding Frame 1
Product Name
lipid-binding START domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.61
Kyte-Doolittle Hydrophobicity Value -0.250
Molecular Weight (kDa) 22099.0
Isoelectric Point (pI) 4.92

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 39 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003784 (512 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2254

Human Homologs

References

No references are associated with this feature.