Pseudomonas mendocina NK-01, MDS_2259

Gene Feature Overview

Strain	Pseudomonas mendocina NK-01 GCF_000204295.1|latest
Locus Tag	MDS_2259
Name
Replicon	chromosome
Genomic location	2463434 - 2464141 (+ strand)

Cross-References

RefSeq	YP_004380042.1
GI	330503173
Entrez	10457041
INSDC	AEB58290.1
NCBI Locus Tag	MDS_2259
UniParc	UPI000206E130
UniProtKB Acc	F4DS91
UniProtKB ID	F4DS91_PSEMN
UniRef100	UniRef100_F4DS91
UniRef50	UniRef50_P51053
UniRef90	UniRef90_U5VGD4

Product

Feature Type	CDS
Coding Frame	1
Product Name	succinate dehydrogenase iron-sulfur subunit
Synonyms
Evidence for Translation
Charge (pH 7)	-0.10
Kyte-Doolittle Hydrophobicity Value	-0.154
Molecular Weight (kDa)	26.0
Isoelectric Point (pI)	6.92

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 525 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003779 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: MDS_2259 Search term: succinate dehydrogenase iron-sulfur subunit

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000480482 succinate dehydrogenase complex iron sulfur subunit B [Source:HGNC Symbol;Acc:HGNC:10681] E-value: 3.1e-68 Percent Identity: 56.1
Ensembl 110, assembly GRCh38.p14	ENSP00000364649 succinate dehydrogenase complex iron sulfur subunit B [Source:HGNC Symbol;Acc:HGNC:10681] E-value: 3.1e-68 Percent Identity: 56.1

References