Pseudomonas mendocina NK-01, MDS_2260

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2260
Name
Replicon chromosome
Genomic location 2464391 - 2467222 (+ strand)

Cross-References

RefSeq YP_004380043.1
GI 330503174
Entrez 10457042
INSDC AEB58291.1
NCBI Locus Tag MDS_2260
UniParc UPI000206E131
UniProtKB Acc F4DS92
UniProtKB ID F4DS92_PSEMN
UniRef100 UniRef100_F4DS92
UniRef50 UniRef50_P20707
UniRef90 UniRef90_W6QXN9

Product

Feature Type CDS
Coding Frame 1
Product Name
2-oxoglutarate dehydrogenase E1 component
Synonyms
Evidence for Translation
Charge (pH 7) -9.80
Kyte-Doolittle Hydrophobicity Value -0.389
Molecular Weight (kDa) 105.9
Isoelectric Point (pI) 6.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 367 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003778 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2260

Human Homologs

Ensembl 110, assembly GRCh38.p14
oxoglutarate dehydrogenase L [Source:HGNC Symbol;Acc:HGNC:25590]
E-value: 1.7e-197
Percent Identity: 41.4

References

No references are associated with this feature.