Pseudomonas mendocina NK-01, MDS_2263

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2263
Name
Replicon chromosome
Genomic location 2470239 - 2471405 (+ strand)

Cross-References

RefSeq YP_004380046.1
GI 330503177
Entrez 10457045
INSDC AEB58294.1
NCBI Locus Tag MDS_2263
UniParc UPI000206E134
UniProtKB Acc F4DS95
UniProtKB ID F4DS95_PSEMN
UniRef100 UniRef100_F4DS95
UniRef50 UniRef50_Q883Z4
UniRef90 UniRef90_Q883Z4

Product

Feature Type CDS
Coding Frame 1
Product Name
succinyl-CoA synthetase subunit beta
Synonyms
Evidence for Translation
Charge (pH 7) -7.21
Kyte-Doolittle Hydrophobicity Value -0.045
Molecular Weight (kDa) 41.5
Isoelectric Point (pI) 5.48

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 535 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003775 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2263

Human Homologs

Ensembl 110, assembly GRCh38.p14
succinate-CoA ligase ADP-forming subunit beta [Source:HGNC Symbol;Acc:HGNC:11448]
E-value: 4.0e-97
Percent Identity: 48.3
Ensembl 110, assembly GRCh38.p14
succinate-CoA ligase ADP-forming subunit beta [Source:HGNC Symbol;Acc:HGNC:11448]
E-value: 4.0e-97
Percent Identity: 48.3

References

No references are associated with this feature.