Pseudomonas mendocina NK-01, MDS_2264

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2264
Name
Replicon chromosome
Genomic location 2471405 - 2472292 (+ strand)

Cross-References

RefSeq YP_004380047.1
GI 330503178
Entrez 10457046
INSDC AEB58295.1
NCBI Locus Tag MDS_2264
UniParc UPI000206E135
UniProtKB Acc F4DS96
UniProtKB ID F4DS96_PSEMN
UniRef100 UniRef100_F4DS96
UniRef50 UniRef50_P36967
UniRef90 UniRef90_Q51567

Product

Feature Type CDS
Coding Frame 1
Product Name
succinyl-CoA synthetase subunit alpha
Synonyms
Evidence for Translation
Charge (pH 7) -1.01
Kyte-Doolittle Hydrophobicity Value 0.191
Molecular Weight (kDa) 30202.8
Isoelectric Point (pI) 6.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 560 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003774 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2264

Human Homologs

Ensembl 110, assembly GRCh38.p14
succinate-CoA ligase GDP/ADP-forming subunit alpha [Source:HGNC Symbol;Acc:HGNC:11449]
E-value: 1.3e-103
Percent Identity: 66.2

References

No references are associated with this feature.