Pseudomonas mendocina NK-01, MDS_2405

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2405
Name
Replicon chromosome
Genomic location 2628384 - 2629913 (+ strand)

Cross-References

RefSeq YP_004380188.1
GI 330503319
Entrez 10457187
INSDC AEB58436.1
NCBI Locus Tag MDS_2405
UniParc UPI000206E494
UniProtKB Acc F4DU08
UniProtKB ID F4DU08_PSEMN
UniRef100 UniRef100_F4DU08
UniRef50 UniRef50_Q9K4V0
UniRef90 UniRef90_F4DU08

Product

Feature Type CDS
Coding Frame 1
Product Name
anaerobic nitric oxide reductase transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.22
Kyte-Doolittle Hydrophobicity Value -0.129
Molecular Weight (kDa) 56129.7
Isoelectric Point (pI) 7.03

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 449 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG029119 (47 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2405

Human Homologs

References

No references are associated with this feature.