Pseudomonas mendocina NK-01, MDS_2406

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2406
Name
Replicon chromosome
Genomic location 2629968 - 2630204 (- strand)

Cross-References

RefSeq YP_004380189.1
GI 330503320
Entrez 10457188
INSDC AEB58437.1
NCBI Locus Tag MDS_2406
UniParc UPI000206E495
UniProtKB Acc F4DU09
UniProtKB ID F4DU09_PSEMN
UniRef100 UniRef100_F4DU09
UniRef50 UniRef50_Q2T6B3
UniRef90 UniRef90_F4DU09

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -5.41
Kyte-Doolittle Hydrophobicity Value -0.591
Molecular Weight (kDa) 8.8
Isoelectric Point (pI) 4.55

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 22 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000199 (402 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2406

Human Homologs

References

No references are associated with this feature.