Pseudomonas mendocina NK-01, MDS_2413

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2413
Name
Replicon chromosome
Genomic location 2635042 - 2637570 (+ strand)

Cross-References

RefSeq YP_004380196.1
GI 330503327
Entrez 10457195
INSDC AEB58444.1
NCBI Locus Tag MDS_2413
UniParc UPI000206E55C
UniProtKB Acc F4DU16
UniProtKB ID F4DU16_PSEMN
UniRef100 UniRef100_F4DU16
UniRef50 UniRef50_I2BVQ6
UniRef90 UniRef90_F4DU16

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent DNA ligase
Synonyms
Evidence for Translation
Charge (pH 7) 24.26
Kyte-Doolittle Hydrophobicity Value -0.503
Molecular Weight (kDa) 93802.8
Isoelectric Point (pI) 10.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 282 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003336 (506 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2413

Human Homologs

References

No references are associated with this feature.