Pseudomonas mendocina NK-01, MDS_2416

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2416
Name
Replicon chromosome
Genomic location 2640517 - 2641164 (- strand)

Cross-References

RefSeq YP_004380199.1
GI 330503330
Entrez 10457198
INSDC AEB58447.1
NCBI Locus Tag MDS_2416
UniParc UPI000206E55F
UniProtKB Acc F4DU19
UniProtKB ID F4DU19_PSEMN
UniRef100 UniRef100_F4DU19
UniRef50 UniRef50_F4DU19
UniRef90 UniRef90_F4DU19

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -12.86
Kyte-Doolittle Hydrophobicity Value -0.207
Molecular Weight (kDa) 23.1
Isoelectric Point (pI) 4.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 2 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG030167 (2 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2416

Human Homologs

References

No references are associated with this feature.