Pseudomonas mendocina NK-01, MDS_2432

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2432
Name
Replicon chromosome
Genomic location 2654166 - 2655332 (+ strand)

Cross-References

RefSeq YP_004380215.1
GI 330503346
Entrez 10457214
INSDC AEB58463.1
NCBI Locus Tag MDS_2432
UniParc UPI000206E56F
UniProtKB Acc F4DU35
UniProtKB ID F4DU35_PSEMN
UniRef100 UniRef100_F4DU35
UniRef50 UniRef50_P77316
UniRef90 UniRef90_A4XUP2

Product

Feature Type CDS
Coding Frame 1
Product Name
alcohol dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -6.11
Kyte-Doolittle Hydrophobicity Value 0.070
Molecular Weight (kDa) 41777.7
Isoelectric Point (pI) 6.18

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 540 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003315 (1467 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2432

Human Homologs

Ensembl 97, assembly GRCh38.p12
alcohol dehydrogenase 4 (class II), pi polypeptide [Source:HGNC Symbol;Acc:HGNC:252]
E-value: 2.2e-19
Percent Identity: 26.8
Ensembl 97, assembly GRCh38.p12
alcohol dehydrogenase 4 (class II), pi polypeptide [Source:HGNC Symbol;Acc:HGNC:252]
E-value: 2.2e-19
Percent Identity: 26.8
Ensembl 97, assembly GRCh38.p12
alcohol dehydrogenase 4 (class II), pi polypeptide [Source:HGNC Symbol;Acc:HGNC:252]
E-value: 2.2e-19
Percent Identity: 26.8
Ensembl 97, assembly GRCh38.p12
alcohol dehydrogenase 4 (class II), pi polypeptide [Source:HGNC Symbol;Acc:HGNC:252]
E-value: 2.2e-19
Percent Identity: 26.5

References

No references are associated with this feature.