Pseudomonas mendocina NK-01, MDS_2437

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2437
Name
Replicon chromosome
Genomic location 2657803 - 2659785 (+ strand)

Cross-References

RefSeq YP_004380220.1
GI 330503351
Entrez 10457219
INSDC AEB58468.1
NCBI Locus Tag MDS_2437
UniParc UPI000206E574
UniProtKB Acc F4DU40
UniProtKB ID F4DU40_PSEMN
UniRef100 UniRef100_F4DU40
UniRef50 UniRef50_Q9I1W4
UniRef90 UniRef90_F4DU40

Product

Feature Type CDS
Coding Frame 1
Product Name
alpha amylase
Synonyms
Evidence for Translation
Charge (pH 7) -14.34
Kyte-Doolittle Hydrophobicity Value -0.431
Molecular Weight (kDa) 75265.5
Isoelectric Point (pI) 5.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 261 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003322 (518 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2437
Search term: alpha amylase

Human Homologs

References

No references are associated with this feature.