Pseudomonas mendocina NK-01, MDS_2517

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2517
Name
Replicon chromosome
Genomic location 2760649 - 2763261 (+ strand)

Cross-References

RefSeq YP_004380300.1
GI 330503431
Entrez 10457299
INSDC AEB58548.1
NCBI Locus Tag MDS_2517
UniParc UPI000206DA88
UniProtKB Acc F4DUS9
UniProtKB ID F4DUS9_PSEMN
UniRef100 UniRef100_F4DUS9
UniRef50 UniRef50_E2XMV4
UniRef90 UniRef90_A4XUD8

Product

Feature Type CDS
Coding Frame 1
Product Name
DEAD/DEAH box helicase
Synonyms
Evidence for Translation
Charge (pH 7) 25.80
Kyte-Doolittle Hydrophobicity Value -0.224
Molecular Weight (kDa) 96679.0
Isoelectric Point (pI) 10.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 400 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002341 (476 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2517

Human Homologs

References

No references are associated with this feature.