Pseudomonas mendocina NK-01, MDS_2524

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2524
Name
Replicon chromosome
Genomic location 2770362 - 2771615 (+ strand)

Cross-References

RefSeq YP_004380307.1
GI 330503438
Entrez 10457306
INSDC AEB58555.1
NCBI Locus Tag MDS_2524
UniParc UPI000206DA8F
UniProtKB Acc F4DUT6
UniProtKB ID F4DUT6_PSEMN
UniRef100 UniRef100_F4DUT6
UniRef50 UniRef50_A0A024HH67
UniRef90 UniRef90_W6QW02

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane porin
Synonyms
Evidence for Translation
Charge (pH 7) -14.14
Kyte-Doolittle Hydrophobicity Value -0.379
Molecular Weight (kDa) 45.7
Isoelectric Point (pI) 4.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 17 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002810 (518 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2524

Human Homologs

References

No references are associated with this feature.