Pseudomonas mendocina NK-01, MDS_2535

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2535
Name
Replicon chromosome
Genomic location 2781497 - 2782735 (+ strand)

Cross-References

RefSeq YP_004380318.1
GI 330503449
Entrez 10457317
INSDC AEB58566.1
NCBI Locus Tag MDS_2535
UniParc UPI000206DA9A
UniProtKB Acc F4DVI0
UniProtKB ID F4DVI0_PSEMN
UniRef100 UniRef100_F4DVI0
UniRef50 UniRef50_Q880Q5
UniRef90 UniRef90_W6QUN4

Product

Feature Type CDS
Coding Frame 1
Product Name
RND family efflux transporter MFP subunit
Synonyms
Evidence for Translation
Charge (pH 7) -1.05
Kyte-Doolittle Hydrophobicity Value -0.295
Molecular Weight (kDa) 44483.9
Isoelectric Point (pI) 6.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 412 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003063 (526 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2535

Human Homologs

References

No references are associated with this feature.