Strain |
Pseudomonas mendocina NK-01
GCF_000204295.1|latest |
Locus Tag |
MDS_2536
|
Name |
|
Replicon | chromosome |
Genomic location | 2782763 - 2785942 (+ strand) |
RefSeq | YP_004380319.1 |
GI | 330503450 |
Entrez | 10457318 |
INSDC | AEB58567.1 |
NCBI Locus Tag | MDS_2536 |
UniParc | UPI000206DA9B |
UniProtKB Acc | F4DVI1 |
UniProtKB ID | F4DVI1_PSEMN |
UniRef100 | UniRef100_F4DVI1 |
UniRef50 | UniRef50_Q8EBL9 |
UniRef90 | UniRef90_S6BID1 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
hydrophobe/amphiphile efflux-1 (HAE1) family protein
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -13.67 |
Kyte-Doolittle Hydrophobicity Value | 0.297 |
Molecular Weight (kDa) | 114893.9 |
Isoelectric Point (pI) | 5.16 |
Individual Mappings | |
Additional evidence for subcellular localization |
Identified using the Resistance Gene Identifier (RGI)
Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
adeF | AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH. [PMID:20696879] | ARO:3000777 | protein homolog model | Strict | 1311.6 | 66.25 | 3.2.5 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 489 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000417 (2093 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: MDS_2536
Search term: hydrophobe/amphiphile efflux-1 (HAE1) family protein
|