Pseudomonas mendocina NK-01, MDS_2667

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2667
Name
Replicon chromosome
Genomic location 2920661 - 2921266 (- strand)

Cross-References

RefSeq YP_004380450.1
GI 330503581
Entrez 10457449
INSDC AEB58698.1
NCBI Locus Tag MDS_2667
UniParc UPI000206DE7B
UniProtKB Acc F4DWJ9
UniProtKB ID F4DWJ9_PSEMN
UniRef100 UniRef100_F4DWJ9
UniRef50 UniRef50_C4ZJZ0
UniRef90 UniRef90_F4DWJ9

Product

Feature Type CDS
Coding Frame 1
Product Name
lysophospholipase
Synonyms
Evidence for Translation
Charge (pH 7) -6.05
Kyte-Doolittle Hydrophobicity Value 0.196
Molecular Weight (kDa) 21271.2
Isoelectric Point (pI) 4.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 245 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002713 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2667
Search term: lysophospholipase

Human Homologs

References

No references are associated with this feature.