Pseudomonas mendocina NK-01, MDS_2674

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2674
Name
Replicon chromosome
Genomic location 2928140 - 2929159 (- strand)

Cross-References

RefSeq YP_004380457.1
GI 330503588
Entrez 10457456
INSDC AEB58705.1
NCBI Locus Tag MDS_2674
UniParc UPI000206DE82
UniProtKB Acc F4DWK6
UniProtKB ID F4DWK6_PSEMN
UniRef100 UniRef100_F4DWK6
UniRef50 UniRef50_F8HAW5
UniRef90 UniRef90_A4XVF6

Product

Feature Type CDS
Coding Frame 1
Product Name
periplasmic binding protein/LacI transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.43
Kyte-Doolittle Hydrophobicity Value 0.003
Molecular Weight (kDa) 37.0
Isoelectric Point (pI) 6.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 376 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003187 (512 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2674

Human Homologs

References

No references are associated with this feature.