Pseudomonas mendocina NK-01, MDS_2773

Gene Feature Overview

Strain	Pseudomonas mendocina NK-01 GCF_000204295.1|latest
Locus Tag	MDS_2773
Name
Replicon	chromosome
Genomic location	3054355 - 3054678 (- strand)

Cross-References

RefSeq	YP_004380556.1
GI	330503687
Entrez	10457555
INSDC	AEB58804.1
NCBI Locus Tag	MDS_2773
UniParc	UPI000206E14C
UniProtKB Acc	F4DY84
UniProtKB ID	F4DY84_PSEMN
UniRef100	UniRef100_F4DY84
UniRef50	UniRef50_Q3K8X6
UniRef90	UniRef90_F4DY84

Product

Feature Type	CDS
Coding Frame	1
Product Name	helix-hairpin-helix repeat-containing competence protein ComEA
Synonyms
Evidence for Translation
Charge (pH 7)	-3.77
Kyte-Doolittle Hydrophobicity Value	0.166
Molecular Weight (kDa)	11.2
Isoelectric Point (pI)	4.57

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 317 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002460 (532 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: MDS_2773 Search term: helix-hairpin-helix repeat-containing competence protein ComEA

Human Homologs

References